Browse of TCMCG065C04749 protein

CDS

Accession Number	TCMCG065C04749
gbkey	CDS
Protein Id	XP_004955773.1
Location	join(6450674..6450875,6450992..6451197,6452154..6452294,6452390..6452566,6453158..6453254,6453856..6453968,6454063..6454185,6454276..6454347,6454458..6454550,6454687..6454797,6454900..6455022,6455405..6455593,6455708..6455782,6455968..6456104,6456359..6456493,6457217..6457356,6457506..6457571,6458031..6458137,6458214..6458294,6458368..6458442,6458531..6458632,6459187..6459340,6459417..6459544,6459873..6459956,6460050..6460150,6460601..6460754,6460847..6460921,6461000..6461150,6461352..6461967,6462439..6462499,6462943..6463088,6463164..6463347,6463425..6463523,6463594..6463913,6464002..6464178,6464455..6464551,6464634..6464789,6464881..6465117,6465213..6465296,6465707..6465832)
Gene	LOC101783290
GeneID	101783290
Organism	Setaria italica

Protein

Length	1904aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA207554
db_source	XM_004955716.3
Definition	rRNA biogenesis protein RRP5 [Setaria italica]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Ribosomal protein S1-like RNA-binding domain
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14792        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000460        [VIEW IN EMBL-EBI] GO:0000462        [VIEW IN EMBL-EBI] GO:0000466        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005886        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006364        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008134        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009553        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016072        [VIEW IN EMBL-EBI] GO:0022613        [VIEW IN EMBL-EBI] GO:0030490        [VIEW IN EMBL-EBI] GO:0030684        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032040        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042254        [VIEW IN EMBL-EBI] GO:0042274        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048229        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCGCCGCCGCGCGGCGATAGGAAGAAGGGGAAGGGCGGTGGCGGCGGCAAGACCGACCTGCGGCCCGACCGCAAGCAGTTCAAAAAGCACCGCAAGGAGGAGGCGGCGTCTGAGCAGGGGGATTGCGACGGGGAGCACCAGCAGCCGGGCTCCGCCGCGCTCCTCGCCGCGGCGTCCGACGAAGCTGACTTCCCGAGAGGGGGACGCAGCTTCCTCAGCAAGGACGAGGTGGCGGAGGCCCGCGCGGAGGCCGAGGAGGATTTCGAGAGGGAGGGGAAGAAGGGGAAGAGGAAGAGGAAGGCCGGCGAGTCGTCTGGTTTCGGTGCGGATGATGACTTGGGGACGCTCTTCGGCGGGGCCACCACCGGGAAGCTCCCACGATTTGCTAATCGCATCACACTGAAGAATGTTTCACCAAATATGAAGCTCTGGGGTGTTGTAATTGAGGTTAACCAAAAAGATATTGTATTAAGTCTACCTGGTGGAATGAGAGGGTTTGTTCGCTCAGAGGATGTATGTGACATCGCTTTGCATGAAAATCGTAAGGATAGCGAGAACAGTATATGTGCTGAAGTCGTTCATGTTGGTCAGCTTGTTCCTTGTATAGTCCTGCGAGTTGATGATGACAGGAAAGAAGGAAAAGTAAACAGAAGGGTTTGGCTATCATTGCGATTAAGCCAGCTGTACAAGGGACTTTCTCTGGATGCCTTGCAGGAAGGAATGGTACTTGCTGCCCAAGTTAAAAGTGTTGAGGACCATGGTTACATTCTTCATTTTGGAGTACCTTCCTTCAGTGGATTTATGCAAAAGGCTGACAAAGAAAATGTGAAGATTGAGCCCAGACAACTGATACAATGTGTTGTGAAGGCTATCGACAAAACTCGGGCTATTGTTCACTTGAGTTCTGATGAAGACTTGGTTTCTAAATCTATTATTAAAGATCTGAAGGGCCTTTCCATTGATCATTTGATTCCTGGTATGATGGTTAATGCACGTGTCCATTCAGTTCTTGAAAATGGAGTAATGTTATCATTTCTTACTTATTTCAGTGGAACTGTTGACATCTTTAATTTGTCAAATCCCTTTCCCTCTGGTAATTGGAAAGATGGTTACAGTAAGAATAAGAAGGTAAATGCTCGCATCCTATTCGTTGATCCATCAACGAGGGCAGTTGGGCTTACATTGAACAAACATTTACTTCATCTTGAAGTGCCCCCTATTAATCTAAAAGCTGGAGATATCTACGATAAATCAAAGGTGTTGAGGATAGATAAAAAGGCTGGTCTTTTTCTTGAAATACCTTCTTCAACTCCATCACCTGGATTTATTAGTATACATGACGTGTCAGACAAAGATGTGAAGAACTTGGAGAAGAAGTTTAAGGAAGGCAGTAGCCTACGCGTCCGTATACTTGGAGTGCGAAATCTTGAAGGAGTTGCAATAGGCACTGTAAAAGACAGTGCTTTTGAAGGATCCGTTTTCACTCATGATGATGTTAAACCTGGAATGTTAGTGAGAGCTAAGGTTGTTACTGTTGAGCCATTTGGTGCAATCGTGCAGTTTTCCAGTGGTGTGAAAGCACTTTGCCCGCTTCCACACATGTCAGAGTTGGAACATGTTGTAAAACCACCAAAGAAATTTAAGGCTGGAGCTGAGCTTCTATTCCGTGTATTGGGCTGCAAATCCAAGAGAGTTACAGTGACATGCAAGAAGTCTCTGGTGAAATCAAAACTTGATGTGCTGGCATCGTATGCTGATGCTAAAGTCGGTTTAGTGACTCATGGATGGATTGCTAAAATCGAAAAGCATGGTTGCTTTGTAAAATTCTATAACGGAGTTCAGGGTTTTGTTAGCAGATCTGAGCTTGGATTAGAGGCAGGAACTGAAGCGGAAAATGTTTATCATGTTGGGCAAGTCATCAAATGTAGAATTATCAGTGTGCTCCCTGCTTCAAGGAGAATAAACGTTAGTTTTGTCATATCTCATAATAGGATTATTCCAGCAGATATTGCAAAGTTGGGTAGTATTGTCTCGGGTGTTGTGGAGCGGCTTACTCCTGCTGCTGTTGTTGTCAGTGTAAATGGCTTCTCCAAGGGGACAATACTAAATGAACATTTGGCAGACCATCATGGTCAAGCTGCTCAGTTGAAGAATTTGCTGAAACCTGGGCACGAGTTCAACCAACTCTTAGTTCTCGATATCGAAGGCCAAAATTTAGTTCTTTCAGCAAAGCACTCACTTATCAATAGCTCAAATGACATTCCTTCAGAGATACTGCAGATGCATCCTGGAGCTTTAGTTCATGGTTATATTTGCAACATCATAGAAGCTGGTTGTTTTGTCCGCTTTCTTGGACATTTGACTGGTTTCTCTCCCAAGGACAAAGCAGTTGATAGGCGGGTGGAAAAGCTTTCTGATGCGTTCTATGTTGGCCAGTCAGTTCGGAGTCATATACTCAGCGTAAACGCAGAAACTGCTAGAGTAAAACTCTCACTTCAACAGTCAATGTGCTCCTCAACGGATTCTTCGTTTATTCAAGGATACTTTCTTTTGGATCAGAAGATTTCGGCATTGAAGTACTCAAGCCATGATTGGGCTCACGCTTTTGGCATTGGTAGCCTAGTTGAGGGGGAGGTGGGAGCAATAGAAGAATATGGTATTGTCCTTAACTTCAATGACCATCCGGATGTTGTTGGTTTAATTGAACATCATCAACTCAGTGACAGTACTCTAGAAGTGGGGTCTTCTGTGAAGGGCCTTGTTTTGGATTTATCTGATGGAGTTGTTAACTTATCCCTTAAACCAGAGCTAATTAGTAGTGTCAGAATTGGTGGAACAAAGAAGAAACGCCAAAGGCCTACAGTTGCAGACTTGGAGCTTCATGAGGAAGTGAATGCAGTTGTGGAGATAGTCAAAGAGAGCTATGTGGTTCTTTCAATCCCCGAGTATAACTATGCAATTGGTTTTGCATCACTGATGGATTACAACTCACAACTGCTTGCCACCCACCGCTATGATAATGGGCAACGCATTACTGTGGTTGTTGGAAATATCCCAAGTTCTGACCCGTCTGGAAGGCTCATCCTACTCCCTAAAGCATCAGCCCAGGATTCTGGCCTGTCTGGTTCTAAAAGGGCTAAGAAAAAATCAGAATACAAAGTTGGGTCACTTGTTGAAGCAGAGATAATTGATATCAAGCCACTAGAACTAATACTGAAATTTGGTGCCAATCTTCATGGAAGAATTCATATTACCGAGGTTCTTGAAGAGGATTCTGCTGAGCGTCCCTTTAGTAAACTCAGAATCGGGCAAAAGCTTACTGCCAGAATTGTTGCAGAGGCTGAACCTTCTGGAAAGAATGGCAAAAACTTCAAATGGGAATTGTCTATTAGACCGTCTATGCTTAAGGGTGAGTTTGAAGAATCAACTGCTCATAAAGAAGAATTTAATCACACCACGAATGTGGTTGTGTGTGGTTATGTCGTCAGAGTGGATAAGGAATGGGTCTGGTTAACTGTATCAAGAAATGTTATGGCTCATTTGTTTATTCTGGATAGTTCTTCTGACCCCAGTGAACTAAAACAGTTCCAGCAGCGCTTTAGTGTAGGCCAAGCAGTAAAAGGCTGTGTTATTAGTGTGAACCGGGAGAAAAGATTGCTTAGGGTGAAAGCACTTGATAACCAATGTGCACAACATAATATAGACAAAATACAACAATCAGAGTCCTCGTTGGTTGAACAAACAAAACAAGGAGATGTCATTGGTGGACGTGTTCAAAAAATTCTACCTGGTGTTGGTGGACTTGTCGTTCAGATTGGACCTCATCTTCATGGAAGGGTTCATTATACTGAAATTGTCGACTCATGGGTGGCAGACCCCTTGTCTGGATTCCATGAGGGTCAATTTGTGAAGTGCAAGGTCCTGTCTGTAAGCCGCTCATCTGAAGGATCTCTTCGAGTTGATCTATCACTCCGCTCATCAAACATACGCACAGATTCTAGCAATTCAAGACTATTTGATGAAGGGGCAACCTGTATCCCACGGATTGAGAAGATAGAGGATCTGCTTCCTGGAACTGAGATTAAGGGCTATGTGAAGAATGTTAATCCCAAAGGATGTTTTATTATGCTTTCTCGAATGGTTGAGGCTAGGATTACTCTGTCAAATTTATCAGATGAATACGTTGAAAATCCTCAGAAGGATTTCCCTGTTGGAATGCTTGTACATGGAAGGGTCTTGTCTACGGACCCATCATCAGGGAGAGTTGAGGCGTCACTCAGGAAGAACACTGGTAGCAAATTAGAAAAGCCGGATGATATTAATTATAGTGATTTACATGTTGGGGACATCATTGATGGCCAAGTTAAGCGGGTTGAATCCTATGGATTATTTGTCACAATTAGGAGCAGTGAATTGGTTGGTCTGTGCCATGTATCAGAACTTTCTGATGAGCCAGTCCTTGATATTAACTCTCGCTATAAAGCTGGTGATATGGTCAAAGCCAAAATTTTGAAGATCGATGAGAAGCGGCACCGAGTATCCCTTGGAATGAAGAAATCGTACTTTGATTGTGGTCTGACTGCTGGTACAAATGATGATGATGAAATTGCTCCTATGGACATCAGCATTGCCTCTCAGGTTGCAGGATATCACAACAAAGTTCATTCCGCAGCAGAACCAAGGGCTTCTGTGCTGCCTCTTCAGGTCTCCTTGGATGAATCTGAAGGTTCTGACCTAGAGGATAATAGTAATGAAGGCCATGAAATTGCCAATGGATCTGAAGCAAATGCTAAAAAGAGTGACAAACGGTTGAAGAAGGAAGCAAGGAAACAAAGGGAATTAGAAATCAGTGCCTTGGAGGAAAGGGCATTACAGGGAGATATACCGAGAACTCCAGATGATTTTGAGAAGTTGGTCAGGAGCTCACCGAATAGTAGTTTTGTCTGGATAAAATATATGGCGTGTTTGTTAGATCTTGCAGATGTTGAGAAAGCACGTGCAATAGCAGAGAGGGCTTTAAAAACAATAATCCCCAGAGAAGAGGAGGAAAGACTTAATGTTTGGGTAGCATATTTCAATCTGGAAAATGAATATGGGAGTCCACGGGAGGATGCTGTCAAGAAGGTATTCCAAAGAGCCTTGCAATACTGTGATCACAAAAAGTTGCACTTGGCCCTTCTCGCAGTGTATGAGAGGACTGAGCAGTACGAACTTGCAGATGAACTTCTTGATAGAATGACCAAAAGATTCAAAACTTCCTGCAAGATATGGTTATGCCGTATTCAGTTTGCCCTCAAGCAAGGCAAGGATGTTGAGTACATCAAAGCTGTTGTAAACCGTGCGCTTCTGAGTTTGCCACAGAGAAAGCGTATAAAATTCCTCTCGAAGACAGCTATTCTAGAATTCAAGTGTGGGGCGCCTGAAGAAGGAAGGTCCAGATTTGAACTAATCTTACGGGAGTACCCAAAAAGAACAGATCTTTGGAGTGTTTATCTAGACCAAGAAATCCGCCTTGGTGACATAGAAATTATAAGGGGATTATTTGATAAGGCTACTTGTCTTACCCTACCTCCAAAAAAGATGCAGTTCTTGTTCAAGAAGTACCTTAAGTTCGAGAAGTCGCTGGGTGAAGACAATGAAAGGATCCAGCATGTGCAGCAGATAGCAATGAAATATGTTCAGAGTTCACTGCCATCCGAAAGCCACCCCTGA

Protein:   MAPPRGDRKKGKGGGGGKTDLRPDRKQFKKHRKEEAASEQGDCDGEHQQPGSAALLAAASDEADFPRGGRSFLSKDEVAEARAEAEEDFEREGKKGKRKRKAGESSGFGADDDLGTLFGGATTGKLPRFANRITLKNVSPNMKLWGVVIEVNQKDIVLSLPGGMRGFVRSEDVCDIALHENRKDSENSICAEVVHVGQLVPCIVLRVDDDRKEGKVNRRVWLSLRLSQLYKGLSLDALQEGMVLAAQVKSVEDHGYILHFGVPSFSGFMQKADKENVKIEPRQLIQCVVKAIDKTRAIVHLSSDEDLVSKSIIKDLKGLSIDHLIPGMMVNARVHSVLENGVMLSFLTYFSGTVDIFNLSNPFPSGNWKDGYSKNKKVNARILFVDPSTRAVGLTLNKHLLHLEVPPINLKAGDIYDKSKVLRIDKKAGLFLEIPSSTPSPGFISIHDVSDKDVKNLEKKFKEGSSLRVRILGVRNLEGVAIGTVKDSAFEGSVFTHDDVKPGMLVRAKVVTVEPFGAIVQFSSGVKALCPLPHMSELEHVVKPPKKFKAGAELLFRVLGCKSKRVTVTCKKSLVKSKLDVLASYADAKVGLVTHGWIAKIEKHGCFVKFYNGVQGFVSRSELGLEAGTEAENVYHVGQVIKCRIISVLPASRRINVSFVISHNRIIPADIAKLGSIVSGVVERLTPAAVVVSVNGFSKGTILNEHLADHHGQAAQLKNLLKPGHEFNQLLVLDIEGQNLVLSAKHSLINSSNDIPSEILQMHPGALVHGYICNIIEAGCFVRFLGHLTGFSPKDKAVDRRVEKLSDAFYVGQSVRSHILSVNAETARVKLSLQQSMCSSTDSSFIQGYFLLDQKISALKYSSHDWAHAFGIGSLVEGEVGAIEEYGIVLNFNDHPDVVGLIEHHQLSDSTLEVGSSVKGLVLDLSDGVVNLSLKPELISSVRIGGTKKKRQRPTVADLELHEEVNAVVEIVKESYVVLSIPEYNYAIGFASLMDYNSQLLATHRYDNGQRITVVVGNIPSSDPSGRLILLPKASAQDSGLSGSKRAKKKSEYKVGSLVEAEIIDIKPLELILKFGANLHGRIHITEVLEEDSAERPFSKLRIGQKLTARIVAEAEPSGKNGKNFKWELSIRPSMLKGEFEESTAHKEEFNHTTNVVVCGYVVRVDKEWVWLTVSRNVMAHLFILDSSSDPSELKQFQQRFSVGQAVKGCVISVNREKRLLRVKALDNQCAQHNIDKIQQSESSLVEQTKQGDVIGGRVQKILPGVGGLVVQIGPHLHGRVHYTEIVDSWVADPLSGFHEGQFVKCKVLSVSRSSEGSLRVDLSLRSSNIRTDSSNSRLFDEGATCIPRIEKIEDLLPGTEIKGYVKNVNPKGCFIMLSRMVEARITLSNLSDEYVENPQKDFPVGMLVHGRVLSTDPSSGRVEASLRKNTGSKLEKPDDINYSDLHVGDIIDGQVKRVESYGLFVTIRSSELVGLCHVSELSDEPVLDINSRYKAGDMVKAKILKIDEKRHRVSLGMKKSYFDCGLTAGTNDDDEIAPMDISIASQVAGYHNKVHSAAEPRASVLPLQVSLDESEGSDLEDNSNEGHEIANGSEANAKKSDKRLKKEARKQRELEISALEERALQGDIPRTPDDFEKLVRSSPNSSFVWIKYMACLLDLADVEKARAIAERALKTIIPREEEERLNVWVAYFNLENEYGSPREDAVKKVFQRALQYCDHKKLHLALLAVYERTEQYELADELLDRMTKRFKTSCKIWLCRIQFALKQGKDVEYIKAVVNRALLSLPQRKRIKFLSKTAILEFKCGAPEEGRSRFELILREYPKRTDLWSVYLDQEIRLGDIEIIRGLFDKATCLTLPPKKMQFLFKKYLKFEKSLGEDNERIQHVQQIAMKYVQSSLPSESHP